Information for 8-CGGCGCTSTTAATACR (Motif 12)

G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A
Reverse Opposite:
A G C T A T C G C G A T C T G A A C G T A C G T G T C A C T G A T A C G C G T A C T A G T A G C C A T G T G A C T A G C C T A G
p-value:1e-8
log p-value:-1.883e+01
Information Content per bp:1.666
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 24.6bp
Average Position of motif in Background35.7 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CGGCGCTSTTAATACR
-----ATATTAATTAA
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.64
Offset:7
Orientation:forward strand
Alignment:CGGCGCTSTTAATACR-
-------GCTAATCCCC
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.63
Offset:7
Orientation:forward strand
Alignment:CGGCGCTSTTAATACR-
-------CCTAATCCGC
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGGCGCTSTTAATACR-
--NNNTTTNTAATACNG
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A A C G T
A C G T A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

SHOX/MA0630.1/Jaspar

Match Rank:5
Score:0.62
Offset:8
Orientation:forward strand
Alignment:CGGCGCTSTTAATACR
--------TTAATTGG
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G

PB0171.1_Sox18_2/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGGCGCTSTTAATACR----
----GGACTGAATTCATGCC
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.61
Offset:8
Orientation:forward strand
Alignment:CGGCGCTSTTAATACR
--------TTAATCCC
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CGGCGCTSTTAATACR
--------TTAATTAN
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.61
Offset:8
Orientation:forward strand
Alignment:CGGCGCTSTTAATACR
--------TTAATCCT
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.61
Offset:8
Orientation:forward strand
Alignment:CGGCGCTSTTAATACR
--------TTAATCCG
 G A T C A T C G A C T G G T A C A T C G G A T C C G A T A T G C A G C T A C G T C G T A G T C A A G C T C G T A A T G C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G