Information for 12-GCAGCCGCGAGAC (Motif 9)

A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A G T C A C T G A T G C A C T G A C T G A G T C A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.528e+01
Information Content per bp:1.947
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.1 +/- 24.2bp
Average Position of motif in Background59.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCCGCGAGAC
CGCAGCTGCG----
 A C G T A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCCGCGAGAC
NAGNTCTCGCGAGAN
 A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

PB0147.1_Max_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCAGCCGCGAGAC--
-NNGTCGCGTGNCAC
 A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C G T
A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCAGCCGCGAGAC--
--AGGTGNCAGACAG
 A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCAGCCGCGAGAC
---GGCACGTGCC
 A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C
A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGCCGCGAGAC
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCAGCCGCGAGAC--
NNNACCGAGAGTNNN
 A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAGCCGCGAGAC
-CAGCC-------
 A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCGCGAGAC-
GGNTCTCGCGAGAAC
 A C G T A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCAGCCGCGAGAC-
--AGGTGHCAGACA
 A C T G A G T C C G T A A C T G A G T C A G T C T A C G G T A C A C T G C G T A A C T G C G T A A G T C A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A