Information for 18-CCAGGGACAGGTA (Motif 15)

A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A
Reverse Opposite:
C G A T C G T A A T G C A G T C C G A T A C T G G C A T A T G C A G T C A G T C C G A T A C T G T C A G
p-value:1e-4
log p-value:-1.088e+01
Information Content per bp:1.777
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif59.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets43.4 +/- 18.6bp
Average Position of motif in Background55.3 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CCAGGGACAGGTA
CCAGGAACAG---
 A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CCAGGGACAGGTA
-----CACAGN--
 A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAGGGACAGGTA-------
YCAGGCWCAGTACCAGGCTC
 A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CCAGGGACAGGTA---
------VCAGGTRDRY
 A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCAGGGACAGGTA--
-----AACAGGAAGT
 A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCAGGGACAGGTA--
-----NACAGGAAAT
 A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCAGGGACAGGTA---
------ACAGGAAGTG
 A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAGGGACAGGTA
-CAAGGHCANV--
 A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCAGGGACAGGTA-
-----AACAGGTGT
 A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CCAGGGACAGGTA-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C T A G A T C G C G T A A G T C C G T A A C T G A T C G C G A T G C T A A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C