Information for 8-GCGGTGTAGT (Motif 13)

A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G T A A G T C C G T A A G T C A G T C A C T G A G T C
p-value:1e-8
log p-value:-1.915e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.2 +/- 19.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTGTAGT
TTGCGGTTT---
 A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCGGTGTAGT---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTGTAGT
TTTGCGGTTT---
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:4
Score:0.58
Offset:-9
Orientation:reverse strand
Alignment:---------GCGGTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTGTAGT
GGGAATTGTAGT
 A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGGTGTAGT----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGGTGTAGT----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTGTAGT--
NNVDGGGYGGGGCYN
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGGTGTAGT--
--GCTGTGGTTT
 A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCGGTGTAGT----
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A