p-value: | 1e-8 |
log p-value: | -1.957e+01 |
Information Content per bp: | 1.951 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.60% |
Number of Background Sequences with motif | 3.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 45.8 +/- 33.4bp |
Average Position of motif in Background | 41.2 +/- 0.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | ATGTCCTAGTCTG- ------TWGTCTGV |
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PB0181.1_Spdef_2/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ATGTCCTAGTCTG GATAACATCCTAGTAG- |
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THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGTCCTAGTCTG--- -TGWCCTCARNTGACC |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ATGTCCTAGTCTG BNTGDCCTTG---- |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGTCCTAGTCTG -TGACCTARTT-- |
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PB0096.1_Zfp187_1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATGTCCTAGTCTG TTATGTACTAATAA- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ATGTCCTAGTCTG -TGACCTYA---- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | ATGTCCTAGTCTG- ----VBSYGTCTGG |
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PB0090.1_Zbtb12_1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATGTCCTAGTCTG- CTAAGGTTCTAGATCAC |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATGTCCTAGTCTG CTGTTCCTGG--- |
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