p-value: | 1e-11 |
log p-value: | -2.674e+01 |
Information Content per bp: | 1.873 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.72% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 37.5 +/- 21.7bp |
Average Position of motif in Background | 72.7 +/- 15.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NKX2-3/MA0672.1/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | RGGCCAYTTSGGW --ACCACTTGAA- |
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NFY(CCAAT)/Promoter/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | RGGCCAYTTSGGW -AGCCAATCGG-- |
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PH0114.1_Nkx2-5/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -RGGCCAYTTSGGW-- TAAGCCACTTGAATTT |
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YY1/MA0095.2/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -RGGCCAYTTSGGW GCNGCCATCTTG-- |
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n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | RGGCCAYTTSGGW -NNCCACGTGG-- |
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PH0111.1_Nkx2-2/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -RGGCCAYTTSGGW--- ATAACCACTTGAAAATT |
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PH0171.1_Nkx2-1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -RGGCCAYTTSGGW-- TAAGCCACTTGAAATT |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | RGGCCAYTTSGGW --ACCACTTAA-- |
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c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | RGGCCAYTTSGGW -NNCCACGTGG-- |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | RGGCCAYTTSGGW ---CCACTTGAA- |
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