Information for 13-AGAGGCTTCATTT (Motif 10)

C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C G T A C A C G T G T A C A C G T
p-value:1e-8
log p-value:-1.938e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.5 +/- 27.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGAGGCTTCATTT---
----GTTTCACTTCCG
 C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGAGGCTTCATTT
----GCTTCC---
 C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAGGCTTCATTT--
---AGTTTCAKTTTC
 C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGAGGCTTCATTT--
---ASTTTCACTTCC
 C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGCTTCATTT
CAGCTGTTTCCT--
 A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAGGCTTCATTT---
-TCAGTTTCATTTTCC
 C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGAGGCTTCATTT-
AAAATGGCGCCATTTT
 A C G T A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

Pax6/MA0069.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCTTCATTT
TTCACGCATGAGTT
 A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGCTTCATTT--
TNNNNGGTGTCATNTNT
 A C G T A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGAGGCTTCATTT--
---AGTTTCAGTTTC
 C G T A A C T G C G T A A C T G A C T G A G T C A C G T A C G T A G T C C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C