Information for 12-GTTTGAAAGYGAR (Motif 6)

C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C C T G A A G T C A C G T A C G T A C G T A G T C C G T A C G T A C T G A A G T C
p-value:1e-11
log p-value:-2.630e+01
Information Content per bp:1.912
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.8 +/- 16.4bp
Average Position of motif in Background60.5 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTTGAAAGYGAR
-TTTGAAACCG--
 C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GTTTGAAAGYGAR---
----GAAAGTGAAAGT
 C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GTTTGAAAGYGAR---
----GAAACTGAAACT
 C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTTTGAAAGYGAR--------
---GGAAAGCGAAACCAAAAC
 C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GTTTGAAAGYGAR---
----GRAASTGAAAST
 C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF7/MA0772.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTTTGAAAGYGAR---
--ACGAAAGCGAAAGT
 C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G A C G T A C G T A C G T
A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTTTGAAAGYGAR---
----GAAASYGAAASY
 C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTTTGAAAGYGAR-----
---AGAAAGTGAAAGTGA
 C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF1/MA0050.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGAAAGYGAR-------
AAANNGAAAGTGAAAGTAAAN
 A C G T C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTTGAAAGYGAR
ATTTGAATT----
 C T A G A G C T A C G T A C G T A C T G G T C A C G T A C G T A A C T G A G C T A C T G C G T A C T A G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T