Information for 10-WWGTCCTAGT (Motif 12)

G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G T A C T A G A C T G C G T A A G T C C G A T C G T A
p-value:1e-8
log p-value:-2.070e+01
Information Content per bp:1.852
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif17.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.1 +/- 32.2bp
Average Position of motif in Background64.5 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:WWGTCCTAGT-
-TGACCTARTT
 G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:WWGTCCTAGT----
TTGACCTANTTATN
 G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:WWGTCCTAGT
-AGGCCTAG-
 G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----WWGTCCTAGT--
GATAACATCCTAGTAG
 A C G T A C G T A C G T A C G T G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WWGTCCTAGT------
GAGCCCTTGTCCCTAA
 G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WWGTCCTAGT
BNTGDCCTTG-
 A C G T G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:WWGTCCTAGT
-AGGCCTNG-
 G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:WWGTCCTAGT-
-TGACCTTGAT
 G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:WWGTCCTAGT----
----ACTAGTTAAC
 G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:WWGTCCTAGT-------
GAAAACTAGTTAACATC
 G C A T C G T A A C T G C G A T A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C