Information for 7-CTGSKCYCTSTASWGG (Motif 7)

A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C G C T A A T C G A C G T C G T A A T C G C G T A A C T G C T A G A C T G G T A C A T C G A G T C G T C A A C T G
p-value:1e-11
log p-value:-2.679e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.5 +/- 31.5bp
Average Position of motif in Background32.7 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTGSKCYCTSTASWGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGSKCYCTSTASWGG---
TAGCGCCCCCTGGTGGCCA
 A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGSKCYCTSTASWGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTGSKCYCTSTASWGG
GYCTGGYYTNTGTCA---
 A C G T A C G T A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T

PB0184.1_Tbp_2/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTGSKCYCTSTASWGG-
--GNNCGCTTAAATCGG
 A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G A C G T
A C G T A C G T C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CTGSKCYCTSTASWGG-
-------BTBRAGTGSN
 A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CTGSKCYCTSTASWGG
WDNCTGGGCA---------
 A C G T A C G T A C G T A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CTGSKCYCTSTASWGG
CNGTCCTCCC--------
 A C G T A C G T A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-CTGSKCYCTSTASWGG
GCTCCGCCCMCY-----
 A C G T A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:10
Score:0.46
Offset:-5
Orientation:reverse strand
Alignment:-----CTGSKCYCTSTASWGG
GCMTBCTGGGAGTTGTAGTY-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A T G C C A T G A G T C A G T C A G T C A C G T A T G C A C G T C G T A A T C G C G A T A C T G A C T G
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T