Information for 9-CACAGKYATTWRA (Motif 8)

A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A
Reverse Opposite:
A C G T A G C T C G T A C G T A C G T A C G A T C T A G T G C A A G T C A G C T A C T G A G C T A C T G
p-value:1e-13
log p-value:-3.032e+01
Information Content per bp:1.848
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.9 +/- 27.2bp
Average Position of motif in Background66.0 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACAGKYATTWRA
CACAGN-------
 A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACAGKYATTWRA----
NAAANTTATTGAANCAN
 A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PH0056.1_Hoxa9/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACAGKYATTWRA-----
-ACGGCCATAAAATTAAT
 A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CACAGKYATTWRA
--CNGTGATTTN-
 A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CACAGKYATTWRA
CAATCACTGGCAGAAT-
 A C G T A C G T A C G T A C G T A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACAGKYATTWRA
AACAGCTGTT---
 A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACAGKYATTWRA
AACAGGAAGT---
 A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACAGKYATTWRA----
CNNANTAATTAATTNNC
 A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A A C G T A C G T A C G T A C G T
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACAGKYATTWRA
-GCAGTGATTT--
 A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACAGKYATTWRA----
-AGAGCCATAAAATTCG
 A G T C C T G A A G T C C T G A A C T G A C G T A G T C C G T A A C G T A C G T C G A T T C A G C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G