Information for 7-GTCCTGAAAT (Motif 4)

A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T
Reverse Opposite:
T C G A A C G T A C G T C G A T A G T C C G T A A C T G A C T G C T G A T A G C
p-value:1e-29
log p-value:-6.774e+01
Information Content per bp:1.856
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif126.7
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets57.9 +/- 22.5bp
Average Position of motif in Background47.9 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTCCTGAAAT
GTCGTAAAAT
 A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

PH0076.1_Hoxd11/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GTCCTGAAAT---
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A C G T A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0077.1_Hoxd12/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GTCCTGAAAT---
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTCCTGAAAT
GGTCGTAAAAT
 A C G T A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

PH0065.1_Hoxc10/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GTCCTGAAAT--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTCCTGAAAT-
GGTCGTAAAATT
 A C G T A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GTCCTGAAAT--
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

HOXC12/MA0906.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTCCTGAAAT
GGTCGTAAAAA
 A C G T A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GTCCTGAAAT--
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T A C G T A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTCCTGAAAT
GTCGTAAAAA
 A T C G A G C T G T A C A G T C A C G T C T A G C G T A C G T A T G C A A G C T
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A