Information for 11-GATACCCAAG (Motif 19)

A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C G T A G T C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 11.3bp
Average Position of motif in Background45.7 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCAAG-
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCAAG-
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0165.1_Six6_1/Jaspar

Match Rank:3
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCAAG-
ANANNTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCAAG-
ANANGTGATACCCCATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCAAG-
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCAAG-
ANANGTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCAAG-
AATNTTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GATACCCAAG---
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GATACCCAAG-
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0158.1_Rfx3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GATACCCAAG-------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A G T C A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T