Information for 10-CAGGGGGTTACVA (Motif 7)

A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A
Reverse Opposite:
C G A T A C G T A C T G A C G T C G T A C G T A A G T C G T A C A G T C A G T C A G T C G A C T A C T G
p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.811
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.3 +/- 22.3bp
Average Position of motif in Background39.6 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CAGGGGGTTACVA
--GGGGATTTCC-
 A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A
A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGGGGGTTACVA---
GCTGGGGGGTACCCCTT
 A C G T A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGGGGGTTACVA
-NGGGGATTTCCC
 A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGGGGGTTACVA-
-AGGGGAATCCCCT
 A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGGGGGTTACVA-
-AGGGGAATCCCCT
 A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGGGGGTTACVA-
--GGGGATTCCCCC
 A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGGGGGTTACVA
--GGGAATTTCC-
 A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGGGGGTTACVA
--GGGGATTTCC-
 A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

PH0121.1_Obox1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGGGGGTTACVA--
TTAAGGGGATTAACTAC
 A C G T A C G T A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGGGGTTACVA
ANTNCCGGGGGGAANTT-
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A C T G A C T G A C T G C T A G C G A T A C G T G T C A A G T C T A C G C G T A
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T