Information for 9-CCAASAKGGSMGCGSS (Motif 12)

A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G
Reverse Opposite:
A T G C A T C G A G T C A C T G A G T C A C G T A T C G A T G C A G T C G T A C A C G T A T G C A C G T A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.5 +/- 36.2bp
Average Position of motif in Background31.8 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCAASAKGGSMGCGSS
-CAAGATGGCGGC---
 A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCAASAKGGSMGCGSS
-CAAGATGGCGGC---
 A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCAASAKGGSMGCGSS--
CAAAAAGGGGCGTGGCAT
 A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCAASAKGGSMGCGSS---
--NNNAAGGGGGCGGGNNN
 A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G A C G T A C G T A C G T
A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCAASAKGGSMGCGSS--
---ATAAGGGCGCGCGAT
 A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G A C G T A C G T
A C G T A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCAASAKGGSMGCGSS
TGCCAA------------
 A C G T A C G T A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCAASAKGGSMGCGSS
TGCCCNNAGGGCA-----
 A C G T A C G T A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCAASAKGGSMGCGSS--
---ATAAAGGCGCGCGAT
 A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G A C G T A C G T
A C G T A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CCAASAKGGSMGCGSS
CGTGCCAAG-----------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCAASAKGGSMGCGSS---
---NCANGCGCGCGCGCCA
 A G T C A G T C C G T A C G T A A T C G G T C A A C T G A C T G A T C G A T G C T G C A A C T G A G T C A C T G A T G C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A