Information for 6-TTAAGAGAAA (Motif 9)

C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A
Reverse Opposite:
C G A T G C A T A G C T A G T C C G A T A G T C G C A T A G C T G T C A G C T A
p-value:1e-8
log p-value:-1.883e+01
Information Content per bp:1.833
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif154.3
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets44.8 +/- 30.3bp
Average Position of motif in Background47.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTAAGAGAAA--
GAAAGTGAAAGT
 C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTAAGAGAAA----
AGAAAGTGAAAGTGA
 A C G T C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTAAGAGAAA----
ATTTACGACAAATAGC
 A C G T A C G T C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAGAGAAA-
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTAAGAGAAA-
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTAAGAGAAA-
CGGAAGTGAAAC
 A C G T C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTAAGAGAAA--
GRAASTGAAAST
 C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTAAGAGAAA--
GAAAGTGAAAGT
 C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTAAGAGAAA
NTTTTACGAGN--
 A C G T A C G T A C G T C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTAAGAGAAA---
TTTCCAGGAAATGG
 A C G T C G A T C A G T C T G A C G T A A C T G C G T A A C T G C T G A C G T A C G T A A C G T A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G