Information for 9-ARRGYTARTTCTC (Motif 4)

C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C G T A G A T C A C G T C G T A C T A G A G T C A G C T A G C T A C G T
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 30.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ARRGYTARTTCTC------
----NNAATTCTCGNTNAN
 C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PH0155.1_Prrx2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ARRGYTARTTCTC----
AAAGCTAATTAGCGAAA
 C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ARRGYTARTTCTC----
ANNNCTAGTTAACNGNN
 C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0015.1_Crx/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ARRGYTARTTCTC----
-AGGCTAATCCCCAANG
 C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ARRGYTARTTCTC----
ATAGTTAATCCCCCNNA
 C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0024.1_Dlx5/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ARRGYTARTTCTC--
NANNGNTAATTACCNN
 A C G T C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

HESX1/MA0894.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ARRGYTARTTCTC
---GCTAATTGGC
 C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C
A C G T A C G T A C G T T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C

RAX/MA0718.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ARRGYTARTTCTC
---NTTAATTGNN
 C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C
A C G T A C G T A C G T C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C

PH0074.1_Hoxd1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ARRGYTARTTCTC----
TAAACTAATTAGCTGTA
 C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ARRGYTARTTCTC--
GNNAGCTAATCCCCCN
 A C G T C G T A C T G A C T G A A C T G G A T C A C G T C G T A C T A G A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T