Information for 9-GGGGATTTAA (Motif 17)

A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A
Reverse Opposite:
G C A T A C G T C G T A C G T A C T G A A C G T A G T C G T A C G T A C G T A C
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.843
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif55.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets40.8 +/- 30.1bp
Average Position of motif in Background51.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0122.1_Obox2/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTTAA---
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTTAA---
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTTAA---
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0124.1_Obox5_1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGGGATTTAA----
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTTAA---
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0129.1_Otx1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGGGATTTAA----
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGGGATTTAA----
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGGATTTAA
TGGGGA-----
 A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGGGATTTAA----
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGGATTTAA----
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C T G A C T G C A T G C T A G G T C A A G C T A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C