Information for 2-TAATATAATG (Motif 9)

A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G
Reverse Opposite:
A G T C G T C A A C G T A G C T C G T A A C G T G T C A A C G T A G C T C G T A
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.915
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.1 +/- 27.2bp
Average Position of motif in Background60.7 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TAATATAATG---
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TAATATAATG---
NANTATTATAATTNNN
 A C G T A C G T A C G T A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TAATATAATG---
NNTAATTATAATNANN
 A C G T A C G T A C G T A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PH0046.1_Hoxa10/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TAATATAATG--
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

PB0064.1_Sox14_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TAATATAATG---
NNTAATTATAATTNNN
 A C G T A C G T A C G T A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAATATAATG-
TAATTTAATTA
 A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G A C G T
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAATATAATG-
TAATTTAATTA
 A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G A C G T
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TAATATAATG---
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TAATATAATG-
---GKTAATGR
 A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

HLF/MA0043.2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TAATATAATG
NGTTACGTAANN
 A C G T A C G T A C G T C T G A C G T A A C G T C G T A A C G T C T G A C G T A A C G T A C T G
C A T G T C A G G C A T C A G T C T G A A G T C T C A G G A C T T G C A C G T A A G C T C T A G