Information for 4-GSMGCAGGGGGCC (Motif 6)

A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
Reverse Opposite:
C T A G C T A G A T G C A G T C G T A C T G A C A G T C A C G T A T C G A G T C A C G T A T G C A G T C
p-value:1e-11
log p-value:-2.699e+01
Information Content per bp:1.768
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.38%
Number of Background Sequences with motif785.9
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets52.4 +/- 25.6bp
Average Position of motif in Background51.4 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GSMGCAGGGGGCC
NCGCAGCGGGGGGTC
 A C G T A C G T A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GSMGCAGGGGGCC
CACAGCGGGGGGTC
 A C G T A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GSMGCAGGGGGCC
NCNCAGCGGGGGGTC
 A C G T A C G T A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GSMGCAGGGGGCC
-SDGCAGGTGCNS
 A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GSMGCAGGGGGCC
DCHCAGCAGGRGGCC
 A C G T A C G T A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GSMGCAGGGGGCC
GTGGGGGAGGGG---
 A C G T A C G T A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GSMGCAGGGGGCC
GGGGGCGGGGC--
 A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GSMGCAGGGGGCC
CTTCGCGGGGGGTC
 A C G T A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GSMGCAGGGGGCC
CACAGCAGGGGG--
 A C G T A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GSMGCAGGGGGCC
GGCGGGGGCGGGGG--
 A C G T A C G T A C G T A C T G T A C G T G C A A C T G T A G C C G T A A C T G A C T G A C T G C T A G A T C G A G T C A G T C
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T