Information for 9-CACCGCAGCT (Motif 19)

A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T
Reverse Opposite:
T C G A A C T G T A G C C G A T A T C G A T G C C T A G T A C G G A C T T C A G
p-value:1e-6
log p-value:-1.562e+01
Information Content per bp:1.688
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif16.03%
Number of Background Sequences with motif4961.2
Percentage of Background Sequences with motif10.46%
Average Position of motif in Targets49.2 +/- 26.9bp
Average Position of motif in Background50.0 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CACCGCAGCT---
---CGCAGCTGCG
 A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CACCGCAGCT---
--NNGCAGCTGTC
 A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CACCGCAGCT--
--CAGCAGCTGN
 A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T A C G T
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CACCGCAGCT---
-NNAGCAGCTGCT
 A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T A C G T A C G T
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CACCGCAGCT---
--NNGCAGCTGTT
 A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CACCGCAGCT----
----GCAGCTGTNN
 A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CACCGCAGCT------
NNNNAGCAGCTGCTGAN
 A C G T A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CACCGCAGCT------
---TGCAGCTGTCCCT
 A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CACCGCAGCT-
---ANCAGCTG
 A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CACCGCAGCT---
---AGCAGCTGCT
 A G T C C T G A A T G C G A T C T A C G A T G C G C T A A T C G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T