Information for 2-SHTGTGGTTW (Motif 2)

A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A
Reverse Opposite:
C G A T G C T A T C G A G A T C G A T C C T G A G T A C C G T A C A G T T A G C
p-value:1e-73
log p-value:-1.698e+02
Information Content per bp:1.633
Number of Target Sequences with motif210.0
Percentage of Target Sequences with motif27.70%
Number of Background Sequences with motif2905.6
Percentage of Background Sequences with motif6.39%
Average Position of motif in Targets50.0 +/- 24.8bp
Average Position of motif in Background50.6 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:SHTGTGGTTW
NNTGTGGTTT
 A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:SHTGTGGTTW
GCTGTGGTTT
 A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:SHTGTGGTTW-
-CTGTGGTTTN
 A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-SHTGTGGTTW-
NNHTGTGGTTWN
 A C G T A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-SHTGTGGTTW
GTCTGTGGTTT
 A C G T A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:SHTGTGGTTW
-TTGCGGTTT
 A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:SHTGTGGTTW
TTTGCGGTTT
 A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:SHTGTGGTTW
---GTGGAT-
 A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-SHTGTGGTTW
TGCTGTGATTT
 A C G T A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----SHTGTGGTTW
ACAGGATGTGGT--
 A C G T A C G T A C G T A C G T A T C G G T C A C G A T A C T G G A C T C T A G C T A G A G C T C G A T G C T A
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T