Information for 15-RTATGTSKKA (Motif 11)

C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A
Reverse Opposite:
A C G T G T C A G T C A A T G C C G T A A G T C G T C A C G A T G T C A A G T C
p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.696
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.73%
Number of Background Sequences with motif1282.6
Percentage of Background Sequences with motif2.82%
Average Position of motif in Targets55.2 +/- 25.7bp
Average Position of motif in Background48.5 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:RTATGTSKKA--
NNHTGTGGTTWN
 C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--RTATGTSKKA
CCATATGT----
 A C G T A C G T C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---RTATGTSKKA
ACCATATGGT---
 A C G T A C G T A C G T C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---RTATGTSKKA
ACCATATGTT---
 A C G T A C G T A C G T C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:RTATGTSKKA
--AGGTGTGA
 C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:RTATGTSKKA
--AGGTGTGA
 C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---RTATGTSKKA
AACATATGTC---
 A C G T A C G T A C G T C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:RTATGTSKKA
--AGGTGTGA
 C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---RTATGTSKKA
ACAGGATGTGGT-
 A C G T A C G T A C G T C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RTATGTSKKA--
-TAGGTGTGAAG
 C T A G A C G T C G T A A C G T A C T G C G A T A T C G A C G T A C G T T G C A A C G T A C G T
A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G