Information for 19-WTTSWARKTC (Motif 37)

C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C
Reverse Opposite:
C T A G C T G A G T A C A G C T G A C T C G A T A T G C C G T A C T G A C G A T
p-value:1e-5
log p-value:-1.218e+01
Information Content per bp:1.640
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 8.3bp
Average Position of motif in Background87.2 +/- 1.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:WTTSWARKTC
TTTGAAACCG
 C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WTTSWARKTC
NATTCAAAT--
 A C G T C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----WTTSWARKTC--
NANTATTATAATTNNN
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----WTTSWARKTC--
NNTAATTATAATTNNN
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----WTTSWARKTC--
NCGTATTATAATCNTA
 A C G T A C G T A C G T A C G T C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:WTTSWARKTC--
-TTCAAGGTCAT
 C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---WTTSWARKTC--
TTGAATGAAATTCGA
 A C G T A C G T A C G T C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--WTTSWARKTC
CCTTTGATGT--
 A C G T A C G T C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WTTSWARKTC
ATTGTT----
 C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---WTTSWARKTC--
NCNTTTGTTATTTNN
 A C G T A C G T A C G T C G T A A G C T A C G T T A C G C G T A C T G A C T G A A C T G A G C T G A T C A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T