Information for 9-CAGCACCTGC (Motif 25)

A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C
Reverse Opposite:
T C A G A G T C G T C A A C T G A C T G C G A T A C T G A T G C G A C T A C T G
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.844
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif236.0
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets46.0 +/- 23.1bp
Average Position of motif in Background50.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CAGCACCTGC--
SNGCACCTGCHS
 A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

TCF3/MA0522.2/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:CAGCACCTGC-
-AACACCTGCT
 A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T
A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:CAGCACCTGC-
--NCACCTGTN
 A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CAGCACCTGC-
-NNCACCTGNN
 A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CAGCACCTGC-
-CGCACCTGCT
 A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T
A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.81
Offset:1
Orientation:forward strand
Alignment:CAGCACCTGC-
-TACACCTGTC
 A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CAGCACCTGC-----
CTCAGCAGCTGCTACTG
 A C G T A C G T A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CAGCACCTGC----
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CAGCACCTGC-
-ACCACCTGTT
 A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CAGCACCTGC-
-AGCAGCTGCT
 A G T C C T G A T A C G T A G C C G T A A G T C A G T C C A G T T C A G A G T C A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T