Information for 14-TCTATGCACTCAG (Motif 18)

C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G
Reverse Opposite:
A G T C C A G T T A C G C G T A T C A G C A G T A C T G G A T C G C T A A G C T C T G A C A T G G C T A
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.679
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif169.9
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets54.5 +/- 27.2bp
Average Position of motif in Background51.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCTATGCACTCAG-
---AGCCACTCAAG
 C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCTATGCACTCAG
---AAGCACTTAA
 C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCTATGCACTCAG
---MRSCACTYAA
 C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCTATGCACTCAG
---AASCACTCAA
 C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCTATGCACTCAG----
NSTGTTTRCWCAGBNNN
 C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCTATGCACTCAG--
TACATGTGCACATAAAA
 A C G T A C G T C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PH0117.1_Nkx3-1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCTATGCACTCAG--
NATTTAAGTACTTANNA
 A C G T A C G T C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:TCTATGCACTCAG-
--------CACAGN
 C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCTATGCACTCAG-
--TGTTTACTTAGG
 C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TCTATGCACTCAG-
NNGTATGTGCACATNNN
 A C G T A C G T A C G T C G A T G T A C A G C T T C G A C G A T C A T G T G A C G C T A A G T C G C A T A G T C G C T A C T A G A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G