Information for 9-CCCCCTGCAGGAC (Motif 11)

A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
Reverse Opposite:
A C T G A C G T A T G C A G T C A C G T A C T G A G T C G T C A A C T G A C T G A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.840
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif29.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.5 +/- 21.3bp
Average Position of motif in Background46.7 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------CCCCCTGCAGGAC
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGCAGGAC
GACCCCCCGCTGTGC
 A C G T A C G T A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGCAGGAC
GACCCCCCGCTGCGC
 A C G T A C G T A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGCAGGAC
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCCTGCAGGAC-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGCAGGAC
GACCCCCCGCTGTG-
 A C G T A C G T A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCCCCTGCAGGAC
CCCCCTGCTGTG-
 A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGCAGGAC
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCCCTGCAGGAC
CACCCCCGGGGGGG-
 A C G T A C G T A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CCCCCTGCAGGAC
AAATTCCCCCCGGAAGT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C G T A C A G T C A C G T A C T G G T A C G T C A A C T G A T C G T G C A A G T C
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T A C G T