Information for 5-CACATGAAAG (Motif 10)

G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G
Reverse Opposite:
G T A C A G C T A G C T C G A T A G T C C T G A C G A T A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.835
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif156.5
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets56.3 +/- 26.7bp
Average Position of motif in Background51.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7L2/MA0523.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CACATGAAAG---
AAAGATCAAAGGAA
 A C G T G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CACATGAAAG---
-ACATCAAAGGNA
 G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T A C G T A C G T
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CACATGAAAG-
-ACATCAAAGG
 G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CACATGAAAG-
-ACWTCAAAGG
 G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CACATGAAAG-----
NNNAGATCAAAGGANNN
 A C G T A C G T G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CACATGAAAG--
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CACATGAAAG-----
TATAGATCAAAGGAAAA
 A C G T A C G T G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACATGAAAG-----
TATAGATCAAAGGAAAA
 A C G T A C G T G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CACATGAAAG-----
NANAGATCAAAGGGNNN
 A C G T A C G T G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CACATGAAAG-
AAAGATCAAAGG
 A C G T G T A C C G T A G T A C C G T A G A C T T C A G C G T A C T G A C T G A A C T G A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G