Information for 23-GAACCTGACTACCAAC (Motif 28)

A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C
Reverse Opposite:
A T C G A C G T A C G T A C T G A C T G A C G T C T G A A C T G A C G T T A G C C G T A A C T G C T A G A C G T A C G T G T A C
p-value:1e-8
log p-value:-1.994e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 32.3bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAACCTGACTACCAAC-
-----GGACCACCCACG
 A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

RXRA::VDR/MA0074.1/Jaspar

Match Rank:2
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAACCTGACTACCAAC
TGAACCCGATGACCC--
 A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GAACCTGACTACCAAC
NCACCTGTN-------
 A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:4
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GAACCTGACTACCAAC
----GCGACCACCGAA
 A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C
A C G T A C G T A C G T A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GAACCTGACTACCAAC
TAATCHGATTAC----
 A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GAACCTGACTACCAAC
GWAAYHTGABMC-----
 A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GAACCTGACTACCAAC
NNNACCTCATTATCNTN
 A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.46
Offset:4
Orientation:forward strand
Alignment:GAACCTGACTACCAAC
----GCGACCACCGAA
 A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C
A C G T A C G T A C G T A C G T C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GAACCTGACTACCAAC
GCAACCTCATTATNNNN
 A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.46
Offset:4
Orientation:forward strand
Alignment:GAACCTGACTACCAAC-
----CTGTCTGTCACCT
 A C T G C G T A C G T A A G T C A G T C A C G T A C T G C G T A A G T C A G C T C G T A A G T C G T A C C G T A C G T A A T G C A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T