Information for 15-AGAGAARCTKCTCKGG (Motif 17)

G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
Reverse Opposite:
G T A C G T A C G T C A T A C G C G T A A C T G G T A C C G T A A C T G A G C T A C G T A C G T A G T C A C G T G A T C C A G T
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.774
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.3 +/- 21.2bp
Average Position of motif in Background49.9 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAGAARCTKCTCKGG
--AGCAGCTGCT----
 G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAGAARCTKCTCKGG
---CAAGCTT------
 G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAARCTKCTCKGG--
TTCTAGAANNTTCCAGAANN
 A C G T A C G T G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGAGAARCTKCTCKGG
TTCTAGAABNTTCTA---
 A C G T A C G T G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGAGAARCTKCTCKGG
------GCTTCC----
 G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGAGAARCTKCTCKGG
ADGGYAGYAGCATCT----
 A C G T A C G T A C G T G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGAGAARCTKCTCKGG
--AGCAGCTGCTNN--
 G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAGAARCTKCTCKGG
CTCAGCAGCTGCTACTG
 A C G T G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGAGAARCTKCTCKGG
GAAAAAATTGCAAGG-
 G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

MSC/MA0665.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGAGAARCTKCTCKGG
--AACAGCTGTT----
 G T C A C A T G C G T A T A C G C G T A C G T A C T G A A G T C A C G T A C T G G T A C A C G T A T G C A C G T A C T G A C T G
A C G T A C G T C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T