Information for 13-MCMTGCACATCTCTGA (Motif 14)

T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A
Reverse Opposite:
C G A T A G T C C G T A A T C G C G T A T A C G C T G A G C A T A C T G C G A T A C T G A T G C G T C A C A G T C T A G A C T G
p-value:1e-11
log p-value:-2.685e+01
Information Content per bp:1.709
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.4 +/- 23.9bp
Average Position of motif in Background42.6 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:MCMTGCACATCTCTGA-----
----NNTNNTGTCTGGNNTNG
 T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:MCMTGCACATCTCTGA
ATATGCAAAT------
 T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:MCMTGCACATCTCTGA
ATATGCAAATNNN---
 T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:MCMTGCACATCTCTGA
TTATGCAAAT------
 T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:MCMTGCACATCTCTGA-
----GCACGTGTCNNNN
 T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:MCMTGCACATCTCTGA
-TATGCAAAT------
 T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.48
Offset:3
Orientation:forward strand
Alignment:MCMTGCACATCTCTGA
---TTCTTATCTGT--
 T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A
A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:forward strand
Alignment:MCMTGCACATCTCTGA
-WATGCAAATGAG---
 T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:MCMTGCACATCTCTGA
-TATGCAAAT------
 T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----MCMTGCACATCTCTGA
NNGTATGTGCACATNNN---
 A C G T A C G T A C G T A C G T T G A C G A T C G T C A A C G T A T C G A G T C C G T A T G A C C G T A A G C T A G T C C G A T A T G C A C G T C T A G C G T A
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G A C G T A C G T A C G T