Information for 11-TGGAGWAGATTGGCTA (Motif 10)

C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A
Reverse Opposite:
A G C T C G T A T A C G A T G C G T A C G T C A T G C A A C G T A G T C C G A T G C A T A G T C G C A T A G T C A G T C C G T A
p-value:1e-12
log p-value:-2.986e+01
Information Content per bp:1.702
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.0 +/- 25.0bp
Average Position of motif in Background62.1 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGGAGWAGATTGGCTA--
------TGATTGGCTANN
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TGGAGWAGATTGGCTA-
NNNNGTTGATTGGGTCG
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TGGAGWAGATTGGCTA
-----CCGATTGGCT-
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TGGAGWAGATTGGCTA
GGGAGGACNG------
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.47
Offset:5
Orientation:forward strand
Alignment:TGGAGWAGATTGGCTA
-----TTRAGTGSYK-
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.47
Offset:9
Orientation:forward strand
Alignment:TGGAGWAGATTGGCTA
---------TTGGCA-
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:TGGAGWAGATTGGCTA----
-----CTGATTGGTCNATTT
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:TGGAGWAGATTGGCTA
----CTTGAGTGGCT-
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:TGGAGWAGATTGGCTA
----GAACAATGGN--
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.46
Offset:2
Orientation:forward strand
Alignment:TGGAGWAGATTGGCTA
--AAGAGGATTAG---
 C G A T A C T G A C T G C G T A C T A G C G T A C G T A T A C G G T C A A C G T A C G T A C T G T A C G A T G C C G A T C T G A
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T