Information for 10-MAGCTTTGTATCCCAG (Motif 8)

G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
Reverse Opposite:
G A T C A C G T A T C G C T A G T A C G G T C A C A G T C G T A G T A C G T C A G T C A C G T A A C T G A G T C C A G T A C T G
p-value:1e-12
log p-value:-2.835e+01
Information Content per bp:1.735
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.9 +/- 29.6bp
Average Position of motif in Background56.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:MAGCTTTGTATCCCAG
--CCTTTGTTTT----
 G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:MAGCTTTGTATCCCAG
---CTTTGT-------
 G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:MAGCTTTGTATCCCAG
AAGCTTG---------
 G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:MAGCTTTGTATCCCAG
--CCWTTGTYYB----
 G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:MAGCTTTGTATCCCAG
--YCTTTGTTCC----
 G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:MAGCTTTGTATCCCAG-
--CCATTGTATGCAAAT
 G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G A C G T
A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---MAGCTTTGTATCCCAG
AGGVNCCTTTGT-------
 A C G T A C G T A C G T G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:MAGCTTTGTATCCCAG
--CCATTGTTTT----
 G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-MAGCTTTGTATCCCAG
CCAGCTGTTN-------
 A C G T G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:MAGCTTTGTATCCCAG
NNNNTTTGTTTACNNT
 G T A C G T C A A C T G G T A C A C G T A C G T A C G T A C T G A C G T G C T A A C G T A G T C A G T C A T G C C G T A C A T G
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T