Information for 15-CCGTTGTGGG (Motif 27)

T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G
Reverse Opposite:
T A G C G T A C T A G C G T C A T G A C T C G A T C G A A G T C A T C G A C T G
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.664
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.58%
Number of Background Sequences with motif1223.8
Percentage of Background Sequences with motif2.55%
Average Position of motif in Targets47.9 +/- 27.3bp
Average Position of motif in Background48.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCGTTGTGGG
CCTTTGTT--
 T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCGTTGTGGG---
-NNHTGTGGTTWN
 T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCGTTGTGGG--
-GTCTGTGGTTT
 T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGTTGTGGG--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCGTTGTGGG
CCWTTGTY--
 T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCGTTGTGGG
-CTTTGT---
 T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCGTTGTGGG
CCWTTGTYYB
 T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGTTGTGGG--
--GCTGTGGTTT
 T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGTTGTGGG--
--NNTGTGGTTT
 T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGTTGTGGG--
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T T G A C T A G C T C A G A G C T A G C T A C T G C A G T A T C G C A T G A T C G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A