Information for 18-TCCAGCCATAMTT (Motif 26)

C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
Reverse Opposite:
C G T A C G T A C A G T A G C T C T G A C G A T A C T G A C T G A G T C A C G T A C T G C T A G C G T A
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.804
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 26.5bp
Average Position of motif in Background55.2 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCCAGCCATAMTT
-BCAGACWA----
 C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TCCAGCCATAMTT
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCCAGCCATAMTT
-CCAGACAG----
 C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCAGCCATAMTT
--CAGCC------
 C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCAGCCATAMTT
-CCAGACRSVB--
 C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCAGCCATAMTT---
-SCAGYCADGCATGAC
 C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGCCATAMTT
ATGCCAGACN-----
 A C G T A C G T C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGCCATAMTT
TTCCCGCCWG----
 A C G T C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGCCATAMTT
TTTCCCGCCMAV---
 A C G T A C G T C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCCAGCCATAMTT
-GCNGCCATCTTG
 C G A T A G T C A G T C C G T A A C T G G T A C A G T C C G T A A G C T C T G A G T C A C G A T A C G T
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G