Information for 14-ATYTTAGTCC (Motif 25)

C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C
Reverse Opposite:
A T C G A T C G G C T A A G T C A C G T C G T A G T C A C T G A G C T A C G A T
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.753
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.42%
Number of Background Sequences with motif390.2
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets48.5 +/- 24.5bp
Average Position of motif in Background49.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ATYTTAGTCC
--TTAAGTGC
 C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ATYTTAGTCC--
--TTAAGTGCTT
 C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C A C G T A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ATYTTAGTCC-
--TTAAGTGGN
 C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C A C G T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATYTTAGTCC------
NATTTAAGTACTTANNA
 A C G T C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATYTTAGTCC-
--TTAAGTGGT
 C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ATYTTAGTCC--
--TTRAGTGSYK
 C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATYTTAGTCC-
-NTCAAGTGGN
 C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATYTTAGTCC-----
NTNNTTAAGTGGTTANN
 A C G T A C G T C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATYTTAGTCC--
--TTGAGTGSTT
 C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATYTTAGTCC
-NTCAAGTGG
 C G T A C G A T A G C T C A G T C G A T C G T A C T A G C G A T A T G C T A G C
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G