Information for 12-TTGATTATAA (Motif 21)

A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A
Reverse Opposite:
A C G T A C G T C T G A A C G T G T C A G T C A C A G T A G T C G T C A C G T A
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.840
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif144.2
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets49.7 +/- 24.3bp
Average Position of motif in Background49.2 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TTGATTATAA-----
TATAATTATAATATTC
 A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TTGATTATAA-----
TTTAATTATAATTAAG
 A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TTGATTATAA-----
TAAGATTATAATACGG
 A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTGATTATAA-----
NNTAATTATAATTNNN
 A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTGATTATAA---
GGGTTTAATTAAAATTC
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A A C G T A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PH0017.1_Cux1_2/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTGATTATAA---
TAGTGATCATCATTA
 A C G T A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A A C G T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTGATTATAA----
CCGTATTATAAACAA
 A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PH0100.1_Lmx1a/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTGATTATAA---
CGAATTAATTAAAAACC
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A A C G T A C G T A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0101.1_Lmx1b/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTATAA---
NNAATTAATTAAAAANN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A A C G T A C G T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTGATTATAA
TAATTGATTA---
 A C G T A C G T A C G T A C G T A C G T T C A G G T C A A C G T C A G T C G T A G A C T C G T A C G T A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T