Information for 15-ASGRGATTAC (Motif 19)

C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C
Reverse Opposite:
A C T G A G C T C G T A C T G A A C G T A T G C A G C T G A T C A T G C A C G T
p-value:1e-6
log p-value:-1.388e+01
Information Content per bp:1.770
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif65.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets56.3 +/- 22.8bp
Average Position of motif in Background52.7 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ASGRGATTAC
--RGGATTAR
 C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ASGRGATTAC
AAGAGGATTAG
 A C G T C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ASGRGATTAC
-NGGGATTA-
 C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ASGRGATTAC
--GGGATTAA
 C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ASGRGATTAC-
-VRGGATTARN
 C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ASGRGATTAC
--NGGATTAA
 C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ASGRGATTAC-
-NNGGATTAGN
 C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ASGRGATTAC-
--GGGATTANN
 C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ASGRGATTAC-
-GNGGATTAGN
 C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ASGRGATTAC
--CGGATTAN
 C G T A T A C G C T A G C T G A T A C G C G T A A G C T C G A T C T G A T A G C
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A