Information for 7-WTTYTTWWAAARATWM (Motif 9)

C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C
Reverse Opposite:
C A T G C G A T C G T A C G A T A G C T A C G T A C G T A C G T C G A T C G A T C G T A C G T A C T G A C T G A C G T A C G T A
p-value:1e-7
log p-value:-1.726e+01
Information Content per bp:1.818
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 21.6bp
Average Position of motif in Background33.8 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----WTTYTTWWAAARATWM
NNNNTTTTTTTTTNAAC----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-WTTYTTWWAAARATWM
CCGTATTATAAACAA--
 A C G T C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WTTYTTWWAAARATWM
-TACTGGAAAAAAAA-
 C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-WTTYTTWWAAARATWM
TCTTTATATATAAATA-
 A C G T C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---WTTYTTWWAAARATWM
NNNATTCCTCGAAAGN---
 A C G T A C G T A C G T C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:WTTYTTWWAAARATWM---
--GTTCAAAAAAAAAATTC
 C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C A C G T A C G T A C G T
A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-WTTYTTWWAAARATWM
NTTTCTNAGAAA-----
 A C G T C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:WTTYTTWWAAARATWM--
--NNTNANAACAATTNNA
 C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C A C G T A C G T
A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-WTTYTTWWAAARATWM
AATATTAATAAAGA---
 A C G T C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-WTTYTTWWAAARATWM
CATTGTTATGCAAAT--
 A C G T C G A T A C G T A G C T A G C T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G A T C G T A G T A C
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T