Information for 7-TGCATCHTGAAAA (Motif 9)

A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A
Reverse Opposite:
A G C T C G A T A C G T A C G T A G T C C G T A C A T G C T A G C G T A A C G T A C T G G T A C G T C A
p-value:1e-11
log p-value:-2.539e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 32.1bp
Average Position of motif in Background68.3 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCATCHTGAAAA
ATTGCATCAK-----
 A C G T A C G T A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCATCHTGAAAA
ATTGCATCAT-----
 A C G T A C G T A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCATCHTGAAAA-
NNTNTCATGAATGT
 A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

HOXC10/MA0905.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGCATCHTGAAAA
---GTCGTAAAAT
 A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A
A C G T A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXD11/MA0908.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGCATCHTGAAAA
---GTCGTAAAAA
 A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A
A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGCATCHTGAAAA
BAGTCATANTGAAAG
 A C G T A C G T A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCATCHTGAAAA-
ATGCATWATGCATRW
 A C G T A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

POU4F1/MA0790.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCATCHTGAAAA
ATGAATAATTAATG
 A C G T A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F2/MA0683.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCATCHTGAAAA--
ATGCATAATTAATGAG
 A C G T A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A A C G T A C G T
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

POU4F3/MA0791.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCATCHTGAAAA--
ATGCATAATTAATGAG
 A C G T A C G T A C T G A G T C G T C A A C G T A G T C G A T C A C G T A C T G C G T A C G T A C G T A C T G A A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G