Information for 10-CTCGCAGGCT (Motif 23)

A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.283e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.2 +/- 20.3bp
Average Position of motif in Background25.7 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCGCAGGCT-
TGCGCAGGCGC
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTCGCAGGCT-
------NGCTN
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCGCAGGCT-
-TBGCACGCAA
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCGCAGGCT
--CACAGN--
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCGCAGGCT---
CTCTCGCGAGATCTG
 A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCGCAGGCT
CACGCA----
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCGCAGGCT
TGCCCCCGGGCA
 A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTCGCAGGCT-
---BCAGACWA
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTCGCAGGCT-
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTCGCAGGCT----
CTGGCAGNCTGCCA
 A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A