Information for 16-CTTCTTTCTTTGG (Motif 20)

A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A C G T A A C T G G T C A C G T A C G T A A C T G G T C A C G T A C T A G
p-value:1e-7
log p-value:-1.794e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 25.3bp
Average Position of motif in Background50.1 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTCTTTCTTTGG--
NNTGTTTATTTTGGCA
 A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTCTTTCTTTGG---
-TTCTATTTTTAGNNN
 A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTTTCTTTGG--
ANTCCTTTGTCTNNNN
 A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTTCTTTCTTTGG
---CCATATATGG
 A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G
A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTTTCTTTGG
ACTTCCTGNT----
 A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTCTTTCTTTGG
GAATGTTTGTTT--
 A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTTTCTTTGG--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTTCTTTCTTTGG--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTTCTTTCTTTGG-
--GCTATTTTTGGM
 A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTTCTTTCTTTGG
GCTTCC--------
 A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T C T A G A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T