Information for 15-CCCCTKCGGAGCT (Motif 19)

A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
Reverse Opposite:
G T C A A T C G A G T C A C G T A G T C A T G C A T C G G T A C G T C A A C T G A C T G C T A G A T C G
p-value:1e-7
log p-value:-1.829e+01
Information Content per bp:1.831
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.1 +/- 28.3bp
Average Position of motif in Background52.8 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCCTKCGGAGCT
GTCCCCAGGGGA---
 A C G T A C G T A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CCCCTKCGGAGCT
------CGGAGC-
 A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCCCTKCGGAGCT
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTKCGGAGCT
CCCCCTGCTGTG--
 A C G T A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCCTKCGGAGCT
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCCTKCGGAGCT
GACCCCCCGCGAAG--
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCCTKCGGAGCT
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCCTKCGGAGCT--
TCCCAGMCRAGCCCC
 A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCCTKCGGAGCT
TCCCNNGGGACN-
 A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCCTKCGGAGCT
GACCCCCCGCTGTG--
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C C A G T A C T G A T G C A T C G C T A G C G T A A C T G A T G C A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T