Information for 3-CACATCAAAG (Motif 5)

T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G
Reverse Opposite:
T G A C G A C T C A G T A G C T T A C G T G C A C A G T A T C G C G A T A T C G
p-value:1e-16
log p-value:-3.688e+01
Information Content per bp:1.649
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif11.89%
Number of Background Sequences with motif2237.4
Percentage of Background Sequences with motif4.74%
Average Position of motif in Targets51.4 +/- 27.4bp
Average Position of motif in Background49.6 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:1
Score:0.87
Offset:1
Orientation:forward strand
Alignment:CACATCAAAG---
-ACATCAAAGGNA
 T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T A C G T A C G T
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CACATCAAAG-
-ACWTCAAAGG
 T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CACATCAAAG---
AAAGATCAAAGGAA
 A C G T T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CACATCAAAG-
-ACATCAAAGG
 T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CACATCAAAG-----
NNNAGATCAAAGGANNN
 A C G T A C G T T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CACATCAAAG-----
NANAGATCAAAGGGNNN
 A C G T A C G T T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CACATCAAAG-----
TATAGATCAAAGGAAAA
 A C G T A C G T T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CACATCAAAG-----
TATAGATCAAAGGAAAA
 A C G T A C G T T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CACATCAAAG-
AAAGATCAAAGG
 A C G T T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CACATCAAAG----
AAAGATCAAAGGGTT
 A C G T T A G C G C T A T A G C G T C A A C G T A T G C T C G A G T C A C T G A A C T G A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T