Information for 7-CCCCGCCGGCGGGGVA (Motif 23)

A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
Reverse Opposite:
A G C T A C T G A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.389e+01
Information Content per bp:1.875
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 25.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCGGCGGGGVA
NCCCCCCCGGGGGGN--
 A C G T A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCCCGCCGGCGGGGVA
CACCCCCGGGGGGG--
 A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCGGCGGGGVA
ACCCCCCCGGGGGGN--
 A C G T A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCCCGCCGGCGGGGVA
----GGGGGCGGGGC-
 A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCCCGCCGGCGGGGVA--
-NAGANTGGCGGGGNGNA
 A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A A C G T A C G T
A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCGGCGGGGVA
NCNCAGCGGGGGGTC--
 A C G T A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCCCGCCGGCGGGGVA
-----GGGGNGGGGC-
 A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCCCGCCGGCGGGGVA
------GGGGGGGG--
 A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCCCGCCGGCGGGGVA
GGGNGGGGGCGGGGC-
 A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCCGGCGGGGVA
NCGCAGCGGGGGGTC--
 A C G T A G T C A G T C A G T C A G T C C T A G A G T C A T G C A T C G A C T G A G T C A C T G A C T G A C T G A C T G T A G C C T G A
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T