Information for 13-GATAAMACTS (Motif 21)

C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C
Reverse Opposite:
T A C G C G T A T C A G G A C T A C T G G C A T A C G T G T C A C G A T G A T C
p-value:1e-7
log p-value:-1.681e+01
Information Content per bp:1.710
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif5.59%
Number of Background Sequences with motif1088.3
Percentage of Background Sequences with motif2.31%
Average Position of motif in Targets49.2 +/- 26.8bp
Average Position of motif in Background50.2 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GATAAMACTS-
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GATAAMACTS
AGATAASR---
 A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GATAAMACTS
AGATAAGA---
 A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GATAAMACTS
CCAATAAAAA--
 A C G T A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GATAAMACTS--
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GATAAMACTS
CCAATAAAAC--
 A C G T A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GATAAMACTS
CCAATAAAAA--
 A C G T A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GATAAMACTS
NBWGATAAGR---
 A C G T A C G T A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GATAAMACTS
NCYAATAAAA---
 A C G T A C G T A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GATAAMACTS
GTCATAAAAN--
 A C G T A C G T C T A G C G T A C A G T T G C A C G T A G T A C C T G A A G T C C G A T A T G C
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T