Information for 12-KSAGMCAGCSCCA (Motif 16)

A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
Reverse Opposite:
A C G T C T A G C T A G A T C G A C T G T G A C A C G T A C T G A C G T A G T C A C G T A T C G G T C A
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.793
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif105.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets68.4 +/- 21.9bp
Average Position of motif in Background52.2 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:KSAGMCAGCSCCA
BCAGACWA-----
 A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:KSAGMCAGCSCCA
CCAGACAG-----
 A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:KSAGMCAGCSCCA
TGAGTCAGCA---
 A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:KSAGMCAGCSCCA
CCAGACRSVB---
 A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----KSAGMCAGCSCCA
CAAATCCAGACATCACA-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KSAGMCAGCSCCA
TGACTCAGCA---
 A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:KSAGMCAGCSCCA
-----CAGCC---
 A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---KSAGMCAGCSCCA
TGCTGASTCAGC----
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:KSAGMCAGCSCCA
---CACAGN----
 A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KSAGMCAGCSCCA--
AGCAACAGCCGCACC
 A C G T A T G C C G T A A C T G G T C A A G T C C G T A A C T G A G T C A T G C A G T C A G T C G T C A A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C