Information for 11-CAGAGAATGGAGG (Motif 14)

A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A G T C C G T A A C G T A G C T A G T C A G C T A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.150e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 20.1bp
Average Position of motif in Background54.3 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CAGAGAATGGAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CAGAGAATGGAGG--
----TAATGGCGGNC
 A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGAGAATGGAGG--
-GGAGAAAGGTGCGA
 A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGAGAATGGAGG------
--NAGANTGGCGGGGNGNA
 A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGAGAATGGAGG
CTCACACAATGGCGC
 A C G T A C G T A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0138.1_Irf4_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CAGAGAATGGAGG
GNNACCGAGAATNNN--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGAGAATGGAGG-
--CAAGATGGCGGC
 A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G A C G T
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGAATGGAGG
GCAGTGATTT----
 A C G T A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CAGAGAATGGAGG-
--CAAGATGGCGGC
 A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGAGAATGGAGG
-RAACAATGGN--
 A G T C C G T A A C T G C T G A A C T G C T G A G T C A A C G T A C T G A C T G G T C A A C T G A C T G
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T