Information for 7-TGCACCTGACCTT (Motif 11)

A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T
Reverse Opposite:
C T G A G T C A A C T G A T C G C A G T A G T C C G T A A C T G C A T G A C G T A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.815
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.8 +/- 20.4bp
Average Position of motif in Background53.1 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ID4/MA0824.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCACCTGACCTT
TACACCTGTC---
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGCACCTGACCTT--
--CNNTTGACCTTTG
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T A C G T A C G T
A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TGCACCTGACCTT--
-----CTGACCTTTG
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TGCACCTGACCTT--
-----NTGACCTTGA
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGCACCTGACCTT-----
--NNNNTGACCTTTNNNN
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGCACCTGACCTT-----
--NNNGTGACCTTTGNNN
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCACCTGACCTT
TGACCTTGACCT-
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TGCACCTGACCTT-
------TGACCTYA
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCACCTGACCTT
-NCACCTGTN---
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TGCACCTGACCTT---
------TGACCTTGAT
 A C G T C T A G G T A C C G T A G T A C A G T C C G A T C T A G G C T A T A G C A G T C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T