Information for 2-TYTGCAGCAATAA (Motif 3)

A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A
Reverse Opposite:
A C G T A G C T T G C A A C G T C G A T A T C G A G T C A C G T A T C G G T A C G T C A C T G A C T G A
p-value:1e-16
log p-value:-3.717e+01
Information Content per bp:1.807
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets44.1 +/- 30.0bp
Average Position of motif in Background51.4 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TYTGCAGCAATAA
CAATTGCAAAAATAT
 A C G T A C G T A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TYTGCAGCAATAA
NNNCTTTCCAGGAAA--
 A C G T A C G T A C G T A C G T A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TYTGCAGCAATAA
NGCTTTCTAGGAAN--
 A C G T A C G T A C G T A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TYTGCAGCAATAA
-TTGCAACATN--
 A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TYTGCAGCAATAA
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TYTGCAGCAATAA--
----AAGCCATAAAA
 A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TYTGCAGCAATAA-
ATTTGCATAACAAAG
 A C G T A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TYTGCAGCAATAA------
--ACAAGCAATTAATGAAT
 A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TYTGCAGCAATAA------
--ACAAGCAATTAATGAAT
 A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

ATF4/MA0833.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TYTGCAGCAATAA
GGATGATGCAATA-
 A C G T A G C T G A C T A C G T A C T G A T G C C G T A A C T G T A G C C G T A G T C A A C G T C T G A C G T A
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A A C G T